Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910187.1_cds_XP_016460274.1_53711
CDS Infomation

[gene=LOC107783768] [db_xref=GeneID:107783768] [protein=ubiquitin carboxyl-terminal hydrolase 12-like] [protein_id=XP_016460274.1] [location=join(22588..22617,23981..24047,24386..24533,24632..24789,26731..26996,27069..27287,27416..27524,27630..27745,27825..27923,28405..28514,31030..31104,31539..31617,31732..31878,31962..32042,32132..32251,32697..32819,33848..33925,34037..34125,35534..35642,35725..35793,35938..36048,36634..36689,36774..36951,37049..37150,37235..37306,37480..37545,37921..37986,38504..38590,38768..38884,39025..39099,39189..39275,39934..39975)] [gbkey=CDS]
Sequence

ATGACTCTGCTCACTCCTCCTCCGATAGATCCAGAAGAGCACGAAATGCTTGTTCCCAGT
TCAGACTTTCCTACTGAGGGACCTCAGCCTATGGAAGTTGCACCAGCGGACACAGCAAGT
ACGGTGGATGCACAGGCTGTGGATGATCCGGCGTCAGCCCGGTTCACATGGACTATCGAT
AATTTTTCAAGGTTGAACGTGAAGAAGTTGTACTCTGATGTTTTTAATGTAGGAGGATAT
AAATGGAGGATATTGATATTCCCAAAAGGGAACAATGTGGACAATTTATCAATGTATTTA
GATGTGGCAGATTCTGCAACATTGCCTTATGGGTGGAGTAGACATGCGCAGTTTAGCTTA
GCTATTCTCAACCGAATTCATAACAAGTTCACTGTGAGAAAAGATACTCAGCACCAGTTT
AATGCAAGAGAGAGTGACTGGGGTTTCACGTCATTCATGCCTCTTAGTGAGCTATATGAT
CCTGGAAGAGGTTATCTTGTGGACGATGCTGTCATAGTTGAAGCTGATGTTGCCGTGCGT
AAAGTCATTGATTACTGGTCCCATGACTCTAAGAAGGAGACTGGCTGTGTTGGCCTTAAG
AATCAGGGAGCCACTTGTTATATGAATTCTCTCCTCCAAACACTATACCATATTCCCTAT
TTTAGAAAGGCTGTGTATCATATGCCAACAACTGAGAATGACAATCCTTCCGGCAGCATC
CCTTTGGCCTTACAGAGCTTATTTTATAAGCTCCAGTATAGTGACACTAGTGTGTCAACA
AAAGAGTTGACAAAGTCCTTTGGGTGGGATACCTATGATTCTTTCATGCAGCATGATGTA
CAAGAACTTAACAGGGTTCTTTGTGAAAAGCTCGAAGATAAGATGAAGGGAACTGTTGTG
GAGGGCACAATACAACAATTACTTGAGGGGCATCATATGAATTATATCGAATGCATCAAT
GTGGACTACAAATCAACAAGAAAAGAATCTTTTTATGATCTTCAGCTTGATGTCAAAGGA
TGTCGTGATGTGTATGCTTCTTTTGACAAGTATGTTGAAGTAGAACGCCTTGAAGGTGAC
AACAAATATCATGCAGAACAACATGGTTTACAGGATGCTCGGAAAGGTGTCCTTTTCATC
GACTTCCCTCCTGTTCTTCAACTTCAGTTAAAACGCTTCGAATATGATTTTGCACGGGAT
GCTATGATCAAGATAAATGACAGATATGAGTTCCCTTTGCAACTCGACCTTGATAGAGAG
AATGGAAAATATTTATCTCCAGACGCAGATCGAAGTGTCCGCAATCTCTATACTCTGCAC
AGTGTTTTAGTTCACAGCGGCGGGGTGCATGGGGGACACTATTATGCTTATATCAGGCCA
ACACTCTCTGATCAATGGTATAAATTTGATGATGAGCGTGTGACAAAAGAAGATACAAAG
AGAGCTCTGGAAGAACAGTATGGTGGTGAGGAAGAGTTACCACACACAAACCCTGGGTTC
AACAATTCACCATTCAAATTTACAAAATATTCGAACGCGTATATGCTTGTTTATATACGT
GAAAGTGACAAGGAAAAGATTATATGCAATGTGGATGAGAAGGACATAGCTGAGCATCTC
AGGATAAGACTAAAGAAAGAGCAAGAAGAAAAGGAACAAAAGAGAAAGGAGAAAGCAGAG
GCTCACCTGTATACAATCATCAAGGTAGCTCGTGATGAAGACCTTGGTGAACAAATCGGA
AAGGAGATTTATTTTGATCTTGTGGATCATGATAAAGTGCGCAGTTTCCGTATTCAGAAA
CAGATGCCATTTACTCAATTCAAGGAGGAAGTTGCAAAAGAATTAGGTATACCGGTGCAA
TTTCAACGTTACTGGCTATGGGCAAAACGGCAGAACCATACGTATCGGCCTAATCGTCCA
TTGACAGCTCAAGAGGAAGTTCAATCCGTTGGCCAACTGAGGGAGGTTTCAAATAAAGCG
AATAATGCTGAGCTGAAACTGTTTCTTGAAGTTGAATTTGGCCTGGATTTGCAACCTTTT
CCTCCATCACAGAAGACCAAGGAAGATATCCTTCTATTTTTCAAACTTTATGACCCTCTG
AAAGAGGAGATTAGGTATGTCGGACGGCTTTTTGTAAAAGGAAGTGGCAAGCCTCATGAG
ATATTAACAAAGCTAAACGAGTTGGCTGGCTTTTTGCCTGATGAAGAAATTGAACTTTTT
GAGGAAATAAAATTTGAGCCCAATGTGATGTGTGAACGCATAGACGGGAAGTTGAGTTTT
CGCGGCAGTCAGCTAGAAGATGGGGATATTATTTGCTTTCAGAAATCCCTTCGAAATCAA
GACAGAGAACAATATCGCTTTCCTGAGGTTCCTTTGTTTTTGGAGTATGTGCACAATCGC
CAGGTTGTTCGTTTTCGTTCATTGGAGAAACCCAAGGAGGACGAGTTCAGTCTTGAGTTG
TCAAAGAAGAACAGCTATGATGAAGTTGTTGAACACTTAGCACGCCATCTTGGCTTGGAT
GATGCATCGAAAGTAAGGCTTACATCACATAACTGCTACTCACAGCAACCAAAACCGCAG
CCAATAAGGTATCGTGGAGTTGATCGTCTCACAGAAATGCTCAGTCACTATAATCAGACT
TCAGATATTCTGTATTATGAAGTCCTGGATATTCCTTTACCAGAGCTGCAGGGCTTAAAA
GCTCTCAAAGTTACTTTCCATCATGCTGCCAAAGATGAAGTCACTATCCATACTATCAGA
TTGCCAAAACAAAGTACCATAGGGGATGTCCTTAACGACCTGAAAACAAAGGTTGAGTTA
ACAAGACCAGATGCTGAACTAAGATTACTGGAAGTTTTTTACCACAAGATATATAAGATT
TTTCCCCTTAATGAAAGGATTGAGAACATAAATGATCAATACTGGACGCTACGTGCAGAG
GAGATTCCTGAAGAGGAGAAAAACCTGGGTCCTCATAGTCGATTAATTCATGTTTATCAT
TTTATGAAGGACACATCTCAAAATCAAGCACAAATACATAACTTTGGTGATCCCTTTTTC
CTGGTTATTCATGAGGGTGACACGTTGACTGAAGTTAAAGCTCGTATTCAGAAAAAATTG
CAGGTTCCAGATGAGGAGTTTTCAAAGTGGAAATTTGCATTTTTATCCATGGGCCGTCCA
GAGTACCTCGAGGACTCGGATGTCGTGTCCAATCGTTTTCAGAAAAGAGATGTGTATGGT
GCTTGGGAACAGTACCTTGGATTAGAGCACATTGACAATGCTCCAAAAAGATCACATGCT
GCCAACCAGAACCGACACACTTTTGAGAAGCCTGTTCGGATCTACAACTAG

Peptide Sequence

PEP ID

XP_016460274.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Nicotiana tabacum]
Sequence

MTLLTPPPIDPEEHEMLVPSSDFPTEGPQPMEVAPADTASTVDAQAVDDPASARFTWTID
NFSRLNVKKLYSDVFNVGGYKWRILIFPKGNNVDNLSMYLDVADSATLPYGWSRHAQFSL
AILNRIHNKFTVRKDTQHQFNARESDWGFTSFMPLSELYDPGRGYLVDDAVIVEADVAVR
KVIDYWSHDSKKETGCVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDNPSGSI
PLALQSLFYKLQYSDTSVSTKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
EGTIQQLLEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
NKYHAEQHGLQDARKGVLFIDFPPVLQLQLKRFEYDFARDAMIKINDRYEFPLQLDLDRE
NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWYKFDDERVTKEDTK
RALEEQYGGEEELPHTNPGFNNSPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHL
RIRLKKEQEEKEQKRKEKAEAHLYTIIKVARDEDLGEQIGKEIYFDLVDHDKVRSFRIQK
QMPFTQFKEEVAKELGIPVQFQRYWLWAKRQNHTYRPNRPLTAQEEVQSVGQLREVSNKA
NNAELKLFLEVEFGLDLQPFPPSQKTKEDILLFFKLYDPLKEEIRYVGRLFVKGSGKPHE
ILTKLNELAGFLPDEEIELFEEIKFEPNVMCERIDGKLSFRGSQLEDGDIICFQKSLRNQ
DREQYRFPEVPLFLEYVHNRQVVRFRSLEKPKEDEFSLELSKKNSYDEVVEHLARHLGLD
DASKVRLTSHNCYSQQPKPQPIRYRGVDRLTEMLSHYNQTSDILYYEVLDIPLPELQGLK
ALKVTFHHAAKDEVTIHTIRLPKQSTIGDVLNDLKTKVELTRPDAELRLLEVFYHKIYKI
FPLNERIENINDQYWTLRAEEIPEEEKNLGPHSRLIHVYHFMKDTSQNQAQIHNFGDPFF
LVIHEGDTLTEVKARIQKKLQVPDEEFSKWKFAFLSMGRPEYLEDSDVVSNRFQKRDVYG
AWEQYLGLEHIDNAPKRSHAANQNRHTFEKPVRIYN

Transcript Sequence

Gene sequence data has not been registered.